Software packages
'synbreed'
'synbreed' is an open-source R package for deriving genome-based predictions from high-throughput genotyping and large-scale phenotyping data. It contains a comprehensive collection of functions required to fit and crossvalidate genomic predictions models.
Publication in "Bioinformatics"
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Manuals
Ogutu JO, Schulz-Streeck T, Piepho H-P (2011) Manual: Phenotypic analysis of plant breeding trials. Version 1.0
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